error: relocation truncated to fit, additional relocation overflows omitted from the output

The recommended flags to use when you have >2GB of static data are:
-mcmodel medium -shared-intel
or

-mcmodel large -shared-intel
(>>2GB)

Make the SGE jobs rerunnable automatically

qconf -mq all.q

and set

rerun                 TRUE

job for Antares3

#!/bin/bash
#
#$ -cwd
#$ -j y
#$ -S /bin/bash
#$ -pe orte 24


. /share/apps/intel/bin/ifortvars.sh intel64
. /share/apps/intel/impi/4.0.3.008/bin64/mpivars.sh


/share/apps/intel/impi/4.0.3.008/bin64/mpiexec.hydra -bootstrap sge /share/apps/SIESTA/3.1/siesta  < Au411.fdf

/etc/exports

/export 10.1.1.1(rw,async,no_root_squash) 10.1.0.0/255.255.0.0(rw,async)
/state/partition1 10.1.1.1(rw,async,no_root_squash) 10.1.0.0/255.255.0.0(rw,async)
/export/home 10.1.1.1(rw,async,no_root_squash) 10.1.0.0/255.255.0.0(rw,async)
/share  10.1.1.1(rw,async,no_root_squash) 10.1.0.0/255.255.0.0(rw,async)

Send files from command line

mandar un archivo:

uuencode surfing.jpeg surfing.jpeg | mail sylvia@home.com

Un directorio
tar cvf - panda | uuencode panda.tar | mail whoever@whatever.com 

tar zcvf - *psf MoS2-wire.out ds5b_30atms.DM ds5b_30atms.XV 
ds5b_30atms.STRUCT_NEXT_ITER  ds5b_30atms.STRUCT_OUT | uuencode MoS2.pseudo.tgz 
| mail quevedin@gmail.com 

Job Ranger

#!/bin/bash
#$ -V # Inherit the submission environment
#$ -cwd # Start job in submission directory
#$ -N MoS2-crushed # Job Name
#$ -j y # Combine stderr and stdout
#$ -o $JOB_NAME.o$JOB_ID # Name of the output file (eg. myMPI.oJobID)
#$ -pe 16way 16 # Requests 16 tasks/node, 32 cores total
#$ -q normal # Queue name "normal"
#$ -A MoS2_Nanocatalysts
#$ -l h_rt=24:00:00 # Run time (hh:mm:ss) - 1.5 hours
#$ -M quevedin+ranger@gmail.com # Use email notification address
#$ -m be # Email at Begin and End of job
#module swap pgi intel/9.1
module load pgi/8.0-6
#/8.0-6pintel/9.1
#module swap mvapich openmpi
#module load openmpi/1.2.4
export GFORTRAN_UNBUFFERED_ALL=1
set -x # Echo commands, use "set echo" with csh
if [ -f MoS2-wire.out ]; then refecha MoS2-wire.out; fi
if [ -f *.ANI ]; then for i in *.ANI ; do refechacp  $i; done; fi
ibrun ~/SIESTA/siesta-3.1/Obj-pgi/siesta < MoS2-wire.final.crushed.fdf | tee MoS2-wire.final.crushed.out # Run the MPI executable named "a.out"

compute-0-3

falla de nuevo, probablemente hay que hacer una melange de piezas

Extract version from RCS

co -r1 /etc/gmond.conf
see diffs:
rcsdiff /etc/gmond.conf
or
diff -r1.2 /etc/gmond.conf